Valentin Riedl ­­­­

Brain Scientist, and making films about science

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Open-source, open-science ready neuroimaging pipeline established

Nov 2020: We have established a nose-to-tail neuroimaging pipeline, grabbing imaging data from the scanner, integrating into XNAT database (BIDS standard), automatized preprocessing/QC-scripts (python), and fully documented analysis pipelines (JupyterHub, docker) ready for open-science repositories and reporting in publications. Please find manuals and video tutorials here: XNAT-imaging pipeline @neuroenergetics lab